Run a bioinformatics pipeline on sequencing data

Executes nf-core pipelines (RNA-seq, variant calling, ATAC-seq) on your FASTQs or pulls public datasets from GEO/SRA. Outputs aligned reads, variants, or gene counts ready for downstream analysis.

Best for: Researchers processing sequencing data without building pipelines from scratch.

Engineering / pipelines-dataatomicfor-engineersneeds-integrationfrom-file

Source

Creator's repository · anthropics/knowledge-work-plugins

View on GitHub

License: Apache-2.0